Sopen10g035900

Description : Pollen allergen

Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g035900
Cluster	HCCA clusters: Cluster_348

Target	Alias	Description	ECC score	Gene Family Method
At2g39700	No alias	Expansin-A4 [Source:UniProtKB/Swiss-Prot;Acc:O48818]	0.02	Orthogroups_2024-Update
At5g39310	No alias	Expansin-A24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL76]	0.03	Orthogroups_2024-Update
Bradi2g53580	No alias	expansin A8	0.04	Orthogroups_2024-Update
Brara.D02404.1	No alias	alpha-class expansin	0.03	Orthogroups_2024-Update
Brara.K00806.1	No alias	alpha-class expansin	0.05	Orthogroups_2024-Update
HORVU3Hr1G081180.2	No alias	alpha-class expansin	0.02	Orthogroups_2024-Update
Kfl00557_g9	kfl00557_g9_v1.1	(at1g12560 : 146.0) Member of Alpha-Expansin Gene...	0.02	Orthogroups_2024-Update
LOC_Os01g60770	No alias	expansin precursor, putative, expressed	0.03	Orthogroups_2024-Update
Mp1g22730.1	No alias	alpha-class expansin	0.03	Orthogroups_2024-Update
Pp1s191_27V6	No alias	alpha expansin xpa5	0.02	Orthogroups_2024-Update
Pp1s191_40V6	No alias	alpha expansin xpa5	0.02	Orthogroups_2024-Update
Seita.5G363100.1	No alias	alpha-class expansin	0.02	Orthogroups_2024-Update
Sobic.004G238801.1	No alias	alpha-class expansin	0.02	Orthogroups_2024-Update
Solyc03g115310	No alias	Expansin (AHRD V3.3 *** Q84L76_PYRCO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	166	243
IPR009009	RlpA-like_DPBB	68	155

External Links

No external refs found!