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  5. A4A49_19166

A4A49_19166


Description : histone h1


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19166
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19000 No alias histone H1-3 0.02 Orthogroups_2024-Update
GRMZM2G164020 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.02G140900 No alias winged-helix DNA-binding transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G094400.5 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
HORVU5Hr1G106610.2 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
Potri.005G116600 No alias histone H1-3 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006334 nucleosome assembly IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 59 124
No external refs found!