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  5. A4A49_19424

A4A49_19424


Description : putative cyclic nucleotide-gated ion channel 5


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19424
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Brara.D01434.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
LOC_Os02g53340 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.04 Orthogroups_2024-Update
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Orthogroups_2024-Update
Potri.006G271050 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 106 430
IPR000595 cNMP-bd_dom 527 615
No external refs found!