A4A49_19426


Description : pentatricopeptide repeat-containing protein, mitochondrial


Gene families : OG_42_0001076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19426
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
At4g36680 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Orthogroups_2024-Update
Bradi3g49480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.E01445.1 No alias component *(mS78/mS79) of small mitoribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Potri.007G028400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G238500.1 No alias component *(mL103) of large mitoribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Seita.1G244100.1 No alias component *(mL103) of large mitoribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.004G223800.1 No alias component *(mL103) of large mitoribosomal-subunit... 0.03 Orthogroups_2024-Update
Sopen03g005350 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 107 133
IPR002885 Pentatricopeptide_repeat 137 185
IPR002885 Pentatricopeptide_repeat 276 325
IPR002885 Pentatricopeptide_repeat 208 249
No external refs found!