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  5. A4A49_19463

A4A49_19463


Description : coatomer subunit beta-1


Gene families : OG_42_0003181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19463
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Bradi2g10950 No alias Coatomer, beta subunit 0.04 Orthogroups_2024-Update
Brara.K01651.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Cre04.g217921 No alias Coatomer, beta subunit 0.04 Orthogroups_2024-Update
Kfl00013_0310 kfl00013_0310_v1.1 (at4g31480 : 1299.0) Coatomer, beta subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00008063-RA No alias (at4g31480 : 1445.0) Coatomer, beta subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00015393-RA No alias (at4g31480 : 1425.0) Coatomer, beta subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s168_28V6 No alias coatomer subunit beta 0.05 Orthogroups_2024-Update
Pp1s309_15V6 No alias coatomer subunit beta 0.06 Orthogroups_2024-Update
Pp1s42_100V6 No alias coatomer subunit beta 0.03 Orthogroups_2024-Update
Seita.5G038000.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Seita.5G398100.1 No alias subunit beta of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
Sobic.003G134800.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
Solyc10g081920 No alias Coatomer subunit beta (AHRD V3.3 *** M1CQJ9_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011710 Coatomer_bsu_C 669 807
IPR002553 Clathrin/coatomer_adapt-like_N 21 466
IPR029446 COPB1_appendage_platform_dom 813 940
No external refs found!