A4A49_19524

Description : protein cobra

Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_19524
Cluster	HCCA clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
At5g15630	No alias	COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]	0.02	Orthogroups_2024-Update
Bradi1g59880	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.02	Orthogroups_2024-Update
Glyma.04G006100	No alias	COBRA-like protein 2 precursor	0.03	Orthogroups_2024-Update
Glyma.06G005800	No alias	COBRA-like protein 1 precursor	0.02	Orthogroups_2024-Update
Glyma.08G249800	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
Glyma.19G033500	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
HORVU2Hr1G033060.7	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.01	Orthogroups_2024-Update
LOC_Os07g41320	No alias	COBRA-like protein precursor, putative, expressed	0.02	Orthogroups_2024-Update
Potri.015G060200	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Orthogroups_2024-Update
Potri.017G098600	No alias	COBRA-like extracellular glycosyl-phosphatidyl...	0.04	Orthogroups_2024-Update
Sobic.001G336700.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	Orthogroups_2024-Update
Sobic.002G368100.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	Orthogroups_2024-Update
Sobic.002G368300.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
Solyc03g114890	No alias	COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	InterProScan predictions
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IEA	InterProScan predictions
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	InterProScan predictions
BP	GO:0040007	growth	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	54	216

External Links

No external refs found!