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  5. A4A49_19670

A4A49_19670


Description : squamosa promoter-binding-like protein 6


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19670
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26720 No alias squamosa promoter binding protein-like 4 0.03 Orthogroups_2024-Update
Bradi3g40030 No alias squamosa promoter binding protein-like 9 0.02 Orthogroups_2024-Update
Brara.E01547.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F00135.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G148467 No alias squamosa promoter binding protein-like 10 0.03 Orthogroups_2024-Update
Glyma.02G121300 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.05G204100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.06G205701 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Glyma.07G109500 No alias squamosa promoter binding protein-like 9 0.02 Orthogroups_2024-Update
Glyma.08G011500 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
HORVU5Hr1G076380.9 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
PSME_00036287-RA No alias (at1g02065 : 120.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
PSME_00041406-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.012G100700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Potri.014G057800 No alias squamosa promoter binding protein-like 10 0.02 Orthogroups_2024-Update
Potri.015G060400 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Pp1s50_127V6 No alias sbp-domain protein 12 0.02 Orthogroups_2024-Update
Seita.3G022100.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G432500.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc10g018780 No alias Squamosa promoter binding protein 8a 0.02 Orthogroups_2024-Update
Sopen07g027780 No alias SBP domain 0.02 Orthogroups_2024-Update
Sopen07g031170 No alias SBP domain 0.03 Orthogroups_2024-Update
Sopen12g018830 No alias SBP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 183 256
No external refs found!