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  5. A4A49_19728

A4A49_19728


Description : 40s ribosomal protein s17


Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19728
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Brara.B00154.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre12.g498250 No alias Ribosomal S17 family protein 0.02 Orthogroups_2024-Update
LOC_Os10g27190 No alias 40S ribosomal protein S17, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.02 Orthogroups_2024-Update
Sobic.010G076400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sopen05g033670 No alias Ribosomal S17 0.03 Orthogroups_2024-Update
Sopen10g032640 No alias Ribosomal S17 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 118
No external refs found!