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  5. A4A49_19905

A4A49_19905


Description : zinc finger protein magpie


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19905
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_17850 No alias zinc finger protein jackdaw 0.05 Orthogroups_2024-Update
Brara.I03408.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G021587 No alias indeterminate(ID)-domain 7 0.02 Orthogroups_2024-Update
Glyma.01G176600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.19G234500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Potri.005G215100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Pp1s218_34V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Seita.5G443300.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 134 155
IPR013087 Znf_C2H2_type 58 80
No external refs found!