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Sopen11g001260


Description : SNF2 family N-terminal domain


Gene families : OG_42_0006138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g001260
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G107920.5 No alias chromatin remodeling factor *(SHPRH) 0.03 Orthogroups_2024-Update
Seita.5G455100.1 No alias chromatin remodeling factor *(SHPRH) 0.03 Orthogroups_2024-Update
Sobic.003G428000.1 No alias chromatin remodeling factor *(SHPRH) 0.03 Orthogroups_2024-Update
Solyc11g005250 No alias SNF2 domain-containing protein / helicase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 1169 1266
IPR011124 Znf_CW 548 590
IPR000330 SNF2_N 288 941
No external refs found!