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  5. A4A49_19992

A4A49_19992


Description : gata transcription factor 5


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_19992
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
69510 No alias GATA transcription factor 20 0.02 Orthogroups_2024-Update
A4A49_15701 No alias gata transcription factor 1 0.03 Orthogroups_2024-Update
A4A49_17145 No alias gata transcription factor 8 0.03 Orthogroups_2024-Update
At2g45050 No alias GATA transcription factor 2... 0.04 Orthogroups_2024-Update
Brara.A00210.1 No alias transcription factor *(A/B-GATA) 0.04 Orthogroups_2024-Update
Brara.K00158.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
GRMZM2G379005 No alias GATA transcription factor 12 0.04 Orthogroups_2024-Update
Glyma.07G016800 No alias GATA transcription factor 9 0.02 Orthogroups_2024-Update
HORVU5Hr1G005990.5 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
MA_103421g0030 No alias (at5g66320 : 154.0) Encodes GATA transcription factor... 0.04 Orthogroups_2024-Update
PSME_00003833-RA No alias (at5g25830 : 159.0) Encodes a member of the GATA factor... 0.01 Orthogroups_2024-Update
PSME_00007174-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.3G175200.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Seita.7G183600.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.004G094100.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.006G162800.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.009G202000.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000679 Znf_GATA 244 277
No external refs found!