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  5. A4A49_20002

A4A49_20002


Description : expansin-a12


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_20002
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
230202 No alias expansin A2 0.02 Orthogroups_2024-Update
A4A49_40187 No alias expansin-a3 0.03 Orthogroups_2024-Update
At1g26770 No alias Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] 0.03 Orthogroups_2024-Update
At5g05290 No alias Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866] 0.03 Orthogroups_2024-Update
Bradi2g22290 No alias expansin A1 0.03 Orthogroups_2024-Update
Bradi3g09950 No alias expansin 11 0.02 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.02 Orthogroups_2024-Update
GRMZM2G105844 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.14G221500 No alias expansin 11 0.02 Orthogroups_2024-Update
Glyma.19G024200 No alias expansin A15 0.02 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g49410 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00045415-RA No alias (at4g01630 : 291.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.001G001100 No alias expansin A15 0.03 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.01 Orthogroups_2024-Update
Seita.1G008200.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen06g017810 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 65 149
IPR007117 Expansin_CBD 160 238
No external refs found!