A4A49_20071

Description : e3 ubiquitin-protein ligase miel1

Gene families : OG_42_0002047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_20071
Cluster	HCCA clusters: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
Cre05.g248550	No alias	zinc finger protein-related	0.01	Orthogroups_2024-Update
LOC_Os05g47780	No alias	E3 ubiquitin ligase, putative, expressed	0.02	Orthogroups_2024-Update
Sopen03g032400	No alias	Zinc-ribbon	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012312	Haemerythrin-like	50	175
IPR012312	Haemerythrin-like	643	795
IPR012312	Haemerythrin-like	305	438
IPR039512	RCHY1_zinc-ribbon	1155	1212
IPR008913	Znf_CHY	979	1054

External Links

No external refs found!