Sopen11g001460

Description : TFIIS helical bundle-like domain

Gene families : OG_42_0005448 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005448_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g001460
Cluster	HCCA clusters: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os11g06650	No alias	transcription elongation factor protein, putative, expressed	0.05	Orthogroups_2024-Update
LOC_Os12g06850	No alias	transcription elongation factor protein, putative, expressed	0.02	Orthogroups_2024-Update
Potri.019G003900	No alias	Transcription elongation factor (TFIIS) family protein	0.04	Orthogroups_2024-Update
Sopen04g027490	No alias	TFIIS helical bundle-like domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR017923	TFIIS_N	138	186

External Links

No external refs found!