Sopen11g001470

Description : VHS domain

Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g001470
Cluster	HCCA clusters: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
A4A49_31199	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Bradi2g53720	No alias	ENTH/VHS/GAT family protein	0.02	Orthogroups_2024-Update
Bradi3g10150	No alias	ENTH/VHS/GAT family protein	0.03	Orthogroups_2024-Update
Brara.H01294.1	No alias	ubiquitin adaptor protein *(TOL)	0.03	Orthogroups_2024-Update
GRMZM2G077844	No alias	ENTH/VHS/GAT family protein	0.02	Orthogroups_2024-Update
GRMZM2G135568	No alias	ENTH/VHS/GAT family protein	0.02	Orthogroups_2024-Update
Glyma.06G082800	No alias	ENTH/VHS/GAT family protein	0.05	Orthogroups_2024-Update
Glyma.06G159800	No alias	ENTH/VHS/GAT family protein	0.03	Orthogroups_2024-Update
LOC_Os02g17350	No alias	VHS and GAT domain containing protein, expressed	0.05	Orthogroups_2024-Update
Potri.018G039100	No alias	ENTH/VHS/GAT family protein	0.02	Orthogroups_2024-Update
Solyc11g005460	No alias	ENTH/VHS/GAT family protein (AHRD V3.3 *** AT5G63640.2)	0.15	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004152	GAT_dom	193	264
IPR002014	VHS_dom	5	110

External Links

No external refs found!