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  5. Sopen11g001480

Sopen11g001480


Description : Alginate lyase


Gene families : OG_42_0004844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g001480
Cluster HCCA clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
131123 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G149120 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU7Hr1G113710.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.001G306932 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.001G307000 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.019G002400 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014895 Alginate_lyase_2 37 209
No external refs found!