A4A49_20339

Description : cyclic nucleotide-gated ion channel 4

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_20339
Cluster	HCCA clusters: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
Brara.A02980.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.05	Orthogroups_2024-Update
Brara.A02981.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Brara.C03656.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.04	Orthogroups_2024-Update
Glyma.09G168700	No alias	cyclic nucleotide-binding transporter 1	0.03	Orthogroups_2024-Update
Potri.014G097900	No alias	cyclic nucleotide gated channel 1	0.02	Orthogroups_2024-Update
Potri.015G033900	No alias	cyclic nucleotide-binding transporter 1	0.04	Orthogroups_2024-Update
Potri.018G009200	No alias	cyclic nucleotide-gated channel 14	0.03	Orthogroups_2024-Update
Pp1s90_245V6	No alias	cyclic nucleotide-gated ion	0.04	Orthogroups_2024-Update
Seita.1G240900.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Seita.9G156700.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.06	Orthogroups_2024-Update
Sopen08g022780	No alias	Ion transport protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	71	378
IPR000595	cNMP-bd_dom	482	569

External Links

No external refs found!