A4A49_20678


Description : auxin response factor 1


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_20678
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
425183 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
At2g28350 No alias Auxin response factor (Fragment)... 0.05 Orthogroups_2024-Update
Bradi3g04920 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
Glyma.04G254200 No alias auxin response factor 17 0.04 Orthogroups_2024-Update
Sopen07g023180 No alias Auxin response factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 531 628
IPR010525 Auxin_resp 253 335
IPR003340 B3_DNA-bd 127 227
No external refs found!