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  5. Sopen11g001730

Sopen11g001730


Description : Pectinesterase


Gene families : OG_42_0002014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g001730
Cluster HCCA clusters: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56820 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
PSME_00008322-RA No alias (at5g09760 : 485.0) Plant invertase/pectin... 0.02 Orthogroups_2024-Update
Solyc03g078100 No alias Pectinesterase (AHRD V3.3 *** K4BHP0_SOLLC) 0.03 Orthogroups_2024-Update
Sopen11g001710 No alias Pectinesterase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 36 180
IPR000070 Pectinesterase_cat 230 534
No external refs found!