1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_20975

A4A49_20975


Description : putative expansin-b2


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_20975
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
At1g65680 No alias Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6] 0.03 Orthogroups_2024-Update
At2g45110 No alias Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1] 0.03 Orthogroups_2024-Update
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.03 Orthogroups_2024-Update
Bradi3g33160 No alias expansin B2 0.02 Orthogroups_2024-Update
Brara.E00483.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.04 Orthogroups_2024-Update
HORVU6Hr1G060410.2 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os05g15690 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427897g0010 No alias (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00005304-RA No alias (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
PSME_00010298-RA No alias (at2g20750 : 169.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.01 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Solyc01g090810 No alias beta-expansin precursor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 82 163
IPR007117 Expansin_CBD 175 258
No external refs found!