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  5. A4A49_21080

A4A49_21080


Description : potassium channel skor


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_21080
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi2g06750 No alias potassium channel in Arabidopsis thaliana 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G072850.4 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
HORVU7Hr1G040990.4 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
PSME_00009949-RA No alias (at2g26650 : 944.0) Encodes AKT1, a member of the Shaker... 0.02 Orthogroups_2024-Update
PSME_00031728-RA No alias (at2g26650 : 297.0) Encodes AKT1, a member of the Shaker... 0.03 Orthogroups_2024-Update
Solyc03g058900 No alias Potassium channel KLT1 (AHRD V3.3 *-* Q0Z957_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g011500 No alias Potassium channel 0.04 Orthogroups_2024-Update
evm.model.tig00020902.49 No alias (at5g37500 : 160.0) Encodes a guard cell outward... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 421 505
IPR020683 Ankyrin_rpt-contain_dom 552 641
IPR021789 KHA_dom 753 822
IPR005821 Ion_trans_dom 81 325
No external refs found!