Sopen11g001970

Description : U-box domain

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g001970
Cluster	HCCA clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
At1g49780	No alias	U-box domain-containing protein 26...	0.03	Orthogroups_2024-Update
At3g02840	No alias	ARM repeat superfamily protein...	0.02	Orthogroups_2024-Update
At3g18710	No alias	RING-type E3 ubiquitin transferase...	0.02	Orthogroups_2024-Update
Brara.E02265.1	No alias	U-Box-group-III E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
GRMZM5G855994	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Glyma.12G095100	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
Glyma.12G189000	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
Glyma.16G170300	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Kfl00108_0050	kfl00108_0050_v1.1	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Pp1s109_251V6	No alias	u-box domain-containing protein	0.02	Orthogroups_2024-Update
Seita.1G186200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc11g068940	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	22	93

External Links

No external refs found!