A4A49_21300

Description : serinearginine-rich splicing factor rs41

Gene families : OG_42_0001097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_21300
Cluster	HCCA clusters: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
Glyma.10G239100	No alias	arginine/serine-rich splicing factor 35	0.03	Orthogroups_2024-Update
Kfl00903_0030	kfl00903_0030_v1.1	(at4g25500 : 200.0) encodes an arginine/serine-rich...	0.02	Orthogroups_2024-Update
PSME_00001277-RA	No alias	(at5g52040 : 285.0) encodes an arginine/serine-rich...	0.02	Orthogroups_2024-Update
Potri.014G101800	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	Orthogroups_2024-Update
Sopen10g005120	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	4	62
IPR000504	RRM_dom	97	159

External Links

No external refs found!