A4A49_21311

Description : pumilio-like 5

Gene families : OG_42_0003031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_21311
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
At3g20250	No alias	PUM5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRW8]	0.02	Orthogroups_2024-Update
LOC_Os09g32210	No alias	pumilio-family RNA binding repeat containing protein, expressed	0.03	Orthogroups_2024-Update
evm.model.tig00001065.15	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	893	925
IPR001313	Pumilio_RNA-bd_rpt	857	890
IPR001313	Pumilio_RNA-bd_rpt	748	778
IPR001313	Pumilio_RNA-bd_rpt	711	743
IPR001313	Pumilio_RNA-bd_rpt	937	959
IPR001313	Pumilio_RNA-bd_rpt	677	705
IPR001313	Pumilio_RNA-bd_rpt	827	852
IPR001313	Pumilio_RNA-bd_rpt	784	817

External Links

No external refs found!