A4A49_21629

Description : nuclear pore complex protein nup96

Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_21629
Cluster	HCCA clusters: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.12G235000	No alias	Nucleoporin autopeptidase	0.03	Orthogroups_2024-Update
Sobic.006G126900.1	No alias	nucleoporin of nuclear pore complex *(NUP98)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007230	Peptidase_S59	47	188
IPR021967	Nup96	572	852

External Links

No external refs found!