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  5. A4A49_22015

A4A49_22015


Description : putative cyclic nucleotide-gated ion channel 15


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_22015
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
84488 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
At2g46450 No alias Probable cyclic nucleotide-gated ion channel 12... 0.06 Orthogroups_2024-Update
At3g48010 No alias Probable cyclic nucleotide-gated ion channel 16... 0.03 Orthogroups_2024-Update
Bradi3g49290 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.02G204300 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
Glyma.03G257000 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Glyma.06G077300 No alias cyclic nucleotide-gated channel 18 0.03 Orthogroups_2024-Update
Glyma.08G241600 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.09G168700 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Glyma.12G133700 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Glyma.16G025300 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Glyma.18G263900 No alias Cyclic nucleotide-regulated ion channel family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
LOC_Os02g41710 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00037092-RA No alias (at5g54250 : 808.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
Potri.001G407800 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Potri.018G009200 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update
Potri.018G106100 No alias cyclic nucleotide gated channel 5 0.02 Orthogroups_2024-Update
Pp1s211_70V6 No alias T3B23.7; cyclic nucleotide-regulated ion channel,... 0.02 Orthogroups_2024-Update
Seita.3G390700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.004G113300.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sobic.004G221000.2 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.008G173700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.009G188800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Solyc09g007840 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.04 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.03 Orthogroups_2024-Update
Sopen05g028790 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 90 409
No external refs found!