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  5. Sopen11g002580

Sopen11g002580


Description : Clp amino terminal domain


Gene families : OG_42_0000981 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000981_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g002580
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_32375 No alias protein smax1-like 3 0.03 Orthogroups_2024-Update
A4A49_37427 No alias protein smax1-like 3 0.03 Orthogroups_2024-Update
Bradi3g43110 No alias Clp amino terminal domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.09G060500 No alias Clp amino terminal domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.20G073000 No alias Double Clp-N motif-containing P-loop nucleoside... 0.04 Orthogroups_2024-Update
LOC_Os04g23220 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_15290g0010 No alias (at3g52490 : 251.0) Double Clp-N motif-containing P-loop... 0.03 Orthogroups_2024-Update
PSME_00007617-RA No alias (at3g52490 : 246.0) Double Clp-N motif-containing P-loop... 0.03 Orthogroups_2024-Update
PSME_00048584-RA No alias (at4g29920 : 421.0) Double Clp-N motif-containing P-loop... 0.02 Orthogroups_2024-Update
Potri.006G204500 No alias Double Clp-N motif-containing P-loop nucleoside... 0.05 Orthogroups_2024-Update
Potri.010G241600 No alias Double Clp-N motif-containing P-loop nucleoside... 0.02 Orthogroups_2024-Update
Sobic.006G074900.1 No alias strigolactone signal modulator *(SMXL) 0.04 Orthogroups_2024-Update
Solyc07g018070 No alias Double Clp-N motif-containing P-loop nucleoside... 0.04 Orthogroups_2024-Update
Solyc11g006650 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update
Sopen07g006950 No alias Clp amino terminal domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004176 Clp_N 130 167
IPR004176 Clp_N 23 54
No external refs found!