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  5. A4A49_22370

A4A49_22370


Description : u-box domain-containing protein 26


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_22370
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
416356 No alias plant U-box 24 0.03 Orthogroups_2024-Update
426053 No alias plant U-box 24 0.03 Orthogroups_2024-Update
At1g66160 No alias U-box domain-containing protein 20... 0.04 Orthogroups_2024-Update
At3g11840 No alias E3 ubiquitin-protein ligase PUB24... 0.03 Orthogroups_2024-Update
At3g52450 No alias RING-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
Bradi5g27660 No alias CYS, MET, PRO, and GLY protein 2 0.02 Orthogroups_2024-Update
Brara.C03388.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02265.1 No alias U-Box-group-III E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G055052 No alias CYS, MET, PRO, and GLY protein 1 0.04 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Glyma.07G106000 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G095100 No alias plant U-box 23 0.03 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Kfl00376_0010 kfl00376_0010_v1.... (at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
LOC_Os02g34410 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_33190g0010 No alias (at2g35930 : 324.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
MA_6335g0010 No alias "(at5g64660 : 281.0) ""CYS, MET, PRO, and GLY protein... 0.04 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.07 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.005G057500 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G016100 No alias plant U-box 24 0.04 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G095100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G441100.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G245100.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 14 85
No external refs found!