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  5. Sopen11g002900

Sopen11g002900


Description : Cupin


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g002900
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Bradi3g15220 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g15250 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g18170 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp2g01930.1 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Sobic.007G067350.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G067600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g102910 No alias Germin family protein (AHRD V3.3 *** G7I5N4_MEDTR) 0.03 Orthogroups_2024-Update
Solyc11g006980 No alias Germin family 1 protein (AHRD V3.3 *** A0A072VRM6_MEDTR) 0.05 Orthogroups_2024-Update
Sopen00g009880 No alias Cupin 0.04 Orthogroups_2024-Update
Sopen01g035140 No alias Cupin 0.02 Orthogroups_2024-Update
Sopen01g045310 No alias Cupin 0.02 Orthogroups_2024-Update
Sopen01g045320 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006045 Cupin_1 54 196
No external refs found!