A4A49_22619

Description : disease resistance protein rpm1

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_22619
Cluster	HCCA clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
At3g46530	No alias	Disease resistance protein RPP13...	0.03	Orthogroups_2024-Update
GRMZM2G162098	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.01G171000	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.08G319300	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.15G168500	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.18G082200	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G107970.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU3Hr1G096920.6	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os04g02860	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g31620	No alias	disease resistance protein RPM1, putative, expressed	0.03	Orthogroups_2024-Update
Seita.2G062100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G342000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.010G017300.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc11g069020	No alias	Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS)	0.03	Orthogroups_2024-Update
Sopen04g004290	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update
Sopen10g020540	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update
Sopen11g027730	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	581	635
IPR002182	NB-ARC	173	421

External Links

No external refs found!