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  5. A4A49_22807

A4A49_22807


Description : casparian strip membrane protein 2


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_22807
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
A4A49_03550 No alias casparian strip membrane protein 1 0.03 Orthogroups_2024-Update
A4A49_12663 No alias casparian strip membrane protein 2 0.06 Orthogroups_2024-Update
A4A49_15920 No alias casparian strip membrane protein 1 0.05 Orthogroups_2024-Update
At2g27370 No alias Casparian strip membrane protein 3... 0.03 Orthogroups_2024-Update
At4g15610 No alias CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29] 0.03 Orthogroups_2024-Update
Bradi2g12830 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Brara.D02195.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update
Brara.F03733.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I00232.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.07G251200 No alias Uncharacterised protein family (UPF0497) 0.04 Orthogroups_2024-Update
HORVU7Hr1G078490.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update
LOC_Os07g26110 No alias membrane associated DUF588 domain containing protein,... 0.03 Orthogroups_2024-Update
Potri.009G160000 No alias Uncharacterised protein family (UPF0497) 0.02 Orthogroups_2024-Update
Potri.011G154900 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Sobic.007G001300.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 23 171
No external refs found!