A4A49_22815

Description : e3 ubiquitin-protein ligase pub23

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_22815
Cluster	HCCA clusters: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
104879	No alias	plant U-box 25	0.05	Orthogroups_2024-Update
231257	No alias	plant U-box 26	0.03	Orthogroups_2024-Update
At3g19380	No alias	U-box domain-containing protein 25...	0.03	Orthogroups_2024-Update
Glyma.03G202600	No alias	plant U-box 22	0.06	Orthogroups_2024-Update
Glyma.06G151200	No alias	CYS, MET, PRO, and GLY protein 2	0.05	Orthogroups_2024-Update
Glyma.13G312700	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
MA_10432813g0010	No alias	(at3g52450 : 140.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
Pp1s356_21V6	No alias	F11F19.16; U-box domain-containing protein [Arabidopsis thaliana]	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	23	94

External Links

No external refs found!