Sopen11g003080

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0010054 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010054_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g003080
Cluster	HCCA clusters: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g57027	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
Seita.1G307900.1	No alias	RNA editing factor *(ORRM1)	0.03	Orthogroups_2024-Update
Solyc11g007160	No alias	RNA binding protein, putative (AHRD V3.3 *** B9SG63_RICCO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	189	255

External Links

No external refs found!