Description : mads-box protein soc1
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Nicotiana release: A4A49_23145 | |
Cluster | HCCA clusters: Cluster_156 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_16645 | No alias | agamous-like mads-box protein agl11 | 0.02 | Orthogroups_2024-Update | |
A4A49_26055 | No alias | mads-box protein agl42 | 0.03 | Orthogroups_2024-Update | |
At1g65360 | No alias | Agamous-like MADS-box protein AGL23... | 0.03 | Orthogroups_2024-Update | |
At3g58780 | No alias | K-box region and MADS-box transcription factor family... | 0.04 | Orthogroups_2024-Update | |
At4g37940 | No alias | Agamous-like MADS-box protein AGL21... | 0.03 | Orthogroups_2024-Update | |
Bradi5g12437 | No alias | AGAMOUS-like 16 | 0.04 | Orthogroups_2024-Update | |
Brara.D02091.1 | No alias | MADS/AGL-type transcription factor | 0.04 | Orthogroups_2024-Update | |
GRMZM2G129034 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G110470.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Potri.015G134800 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Seita.6G194800.1 | No alias | MADS/AGL-type transcription factor | 0.04 | Orthogroups_2024-Update | |
Solyc05g015730 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Sopen12g029850 | No alias | SRF-type transcription factor (DNA-binding and... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002487 | TF_Kbox | 24 | 111 |
No external refs found! |