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  5. A4A49_23886

A4A49_23886


Description : pleiotropic drug resistance protein 1


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_23886
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
82705 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
A4A49_24419 No alias pleiotropic drug resistance protein 3 0.02 Orthogroups_2024-Update
Bradi2g04847 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Bradi3g41987 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Brara.C01827.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.D01603.1 No alias cuticular lipid exporter *(PEC1) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM2G366146 No alias pleiotropic drug resistance 1 0.05 Orthogroups_2024-Update
GRMZM2G477872 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Kfl00855_0010 kfl00855_0010_v1.1 (q8gu89|pdr4_orysa : 1415.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00000647-RA No alias (at1g59870 : 1668.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Pp1s160_34V6 No alias atp-binding cassette 0.05 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.010G165500.3 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g091670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 81 143
IPR013581 PDR_assoc 721 785
IPR003439 ABC_transporter-like 168 350
IPR013525 ABC_2_trans 504 716
IPR013525 ABC_2_trans 1180 1394
IPR003439 ABC_transporter-like 883 1035
No external refs found!