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  5. Sopen11g003810

Sopen11g003810


Description : KH domain


Gene families : OG_42_0003785 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g003810
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cre08.g379100 No alias binding to TOMV RNA 1L (long form) 0.01 Orthogroups_2024-Update
HORVU6Hr1G068570.26 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00162_0020 kfl00162_0020_v1.1 (at5g04430 : 241.0) Gene model AT5G04430.1 produces... 0.02 Orthogroups_2024-Update
Mp6g08740.1 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Solyc05g055450 No alias RNA-binding Nova-1 (AHRD V3.3 *** A0A0B0MMT7_GOSAR) 0.06 Orthogroups_2024-Update
Solyc11g007940 No alias RNA-binding protein Nova-1 (AHRD V3.3 *** A0A151T0U1_CAJCA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 129 193
IPR004088 KH_dom_type_1 254 318
IPR004088 KH_dom_type_1 44 108
No external refs found!