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  5. Sopen11g003960

Sopen11g003960


Description : Early transcription elongation factor of RNA pol II, NGN section


Gene families : OG_42_0008839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g003960
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Sobic.009G190200.1 No alias RNA polymerase-V auxiliary factor *(KTF1/SPT5L) 0.03 Orthogroups_2024-Update
Solyc11g008150 No alias Transcription elongation factor SPT5 (AHRD V3.3 *-* A9SZZ9_PHYPA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005100 NGN-domain 158 241
IPR022581 Spt5_N 52 151
No external refs found!