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  5. A4A49_24419

A4A49_24419


Description : pleiotropic drug resistance protein 3


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_24419
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
235359 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
99541 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_23886 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.01 Orthogroups_2024-Update
LOC_Os01g42410 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g32690 No alias pleiotropic drug resistance protein 15, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g33780 No alias pleiotropic drug resistance protein 5, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00037776-RA No alias (at1g59870 : 665.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
Potri.001G251100 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Potri.018G074500 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s375_55V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s59_42V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.4G210500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G087700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc11g007280 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1178 1391
IPR013525 ABC_2_trans 524 735
IPR013581 PDR_assoc 740 798
IPR029481 ABC_trans_N 113 163
IPR003439 ABC_transporter-like 188 371
IPR003439 ABC_transporter-like 880 1031
No external refs found!