A4A49_24470

Description : rhomboid-like protein 20

Gene families : OG_42_0004364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004364_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_24470
Cluster	HCCA clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
HORVU3Hr1G038170.2	No alias	protease *(RBL)	0.05	Orthogroups_2024-Update
PSME_00021661-RA	No alias	(at3g56740 : 291.0) Ubiquitin-associated (UBA) protein;...	0.03	Orthogroups_2024-Update
evm.model.tig00000042.109	No alias	(at3g56740 : 164.0) Ubiquitin-associated (UBA) protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022764	Peptidase_S54_rhomboid_dom	46	190
IPR015940	UBA	252	287

External Links

No external refs found!