1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g091220

Solyc02g091220


Description : Eukaryotic translation initiation factor 5 (AHRD V3.3 *** IF5_PHAVU)


Gene families : OG_42_0001995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001995_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g091220
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G001200 No alias Translation initiation factor IF2/IF5 0.03 Orthogroups_2024-Update
Pp1s626_4V6 No alias Eukaryotic translation initiation factor 5 (eIF-5) [Zea mays] 0.02 Orthogroups_2024-Update
Pp1s93_126V6 No alias eukaryotic translation initiation factor 5 0.02 Orthogroups_2024-Update
Sopen02g035840 No alias Domain found in IF2B/IF5 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006413 translational initiation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003307 W2_domain 372 450
IPR002735 Transl_init_fac_IF2/IF5 11 127
No external refs found!