1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen11g004370

Sopen11g004370


Description : IBR domain


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g004370
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
121590 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_14246 No alias putative e3 ubiquitin-protein ligase ari8 0.02 Orthogroups_2024-Update
At1g05880 No alias Probable E3 ubiquitin-protein ligase ARI12... 0.03 Orthogroups_2024-Update
Bradi1g14425 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g14430 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g69300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g41760 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Bradi3g48130 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Brara.A00383.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G00341.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Glyma.11G129000 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G055260.4 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
PSME_00007947-RA No alias (at4g34370 : 140.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc... 0.02 Orthogroups_2024-Update
PSME_00019570-RA No alias (at1g65430 : 765.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.002G131300 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Potri.007G126900 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Potri.008G077100 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Seita.9G483400.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G210000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase & component... 0.03 Orthogroups_2024-Update
Sobic.007G185900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 288 336
IPR002867 IBR_dom 209 271
No external refs found!