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  5. Solyc02g091230

Solyc02g091230


Description : RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A061EGA0_THECC)


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g091230
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Brara.J00118.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
PSME_00029909-RA No alias (at3g47550 : 228.0) RING/FYVE/PHD zinc finger... 0.01 Orthogroups_2024-Update
Seita.8G176200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sopen01g031300 No alias Protein of unknown function (DUF3675) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 4 49
IPR022143 DUF3675 55 169
No external refs found!