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  5. Sopen11g004490

Sopen11g004490


Description : Ribosomal protein S5, C-terminal domain


Gene families : OG_42_0007469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g004490
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At1g64880 No alias At1g64880 [Source:UniProtKB/TrEMBL;Acc:Q6GKU7] 0.05 Orthogroups_2024-Update
Brara.B02568.1 No alias component *(uS5m) of small mitoribosomal-subunit proteome 0.06 Orthogroups_2024-Update
GRMZM2G114888 No alias Ribosomal protein S5 family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G115780.1 No alias component *(uS5m) of small mitoribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Mp4g01640.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.05 Orthogroups_2024-Update
Seita.1G002100.1 No alias component *(uS5m) of small mitoribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.004G002500.1 No alias component *(uS5m) of small mitoribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Solyc11g008710 No alias Ribosomal protein S5 family protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 423 490
IPR013810 Ribosomal_S5_N 345 409
No external refs found!