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  5. A4A49_25670

A4A49_25670


Description : polyubiquitin 4


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_25670
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cre01.g007051 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.02 Orthogroups_2024-Update
Cre13.g563600 No alias polyubiquitin 10 0.01 Orthogroups_2024-Update
Kfl00345_0130 kfl00345_0130_v1.... (at3g52590 : 254.0) Ubiquitin extension protein;... 0.04 Orthogroups_2024-Update
LOC_Os06g44080 No alias ubiquitin family protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s17_265V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.03 Orthogroups_2024-Update
evm.model.contig_2055.11 No alias (at3g52590 : 241.0) Ubiquitin extension protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00022075.50 No alias (at3g52590 : 236.0) Ubiquitin extension protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
No external refs found!