Sopen11g004890

Description : ABC-2 type transporter

Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g004890
Cluster	HCCA clusters: Cluster_292

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g08130	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
GRMZM2G177314	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
GRMZM2G177812	No alias	white-brown complex homolog protein 11	0.04	Orthogroups_2024-Update
GRMZM5G817964	No alias	white-brown complex homolog protein 11	0.04	Orthogroups_2024-Update
GRMZM5G870629	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
Glyma.11G093900	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Potri.017G155300	No alias	white-brown complex homolog protein 11	0.02	Orthogroups_2024-Update
Sobic.010G136900.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Solyc11g065350	No alias	ABC transporter-related family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	40	190
IPR013525	ABC_2_trans	339	545

External Links

No external refs found!