1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen11g004900

Sopen11g004900


Description : Ras family


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g004900
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Bradi1g38190 No alias RAB GTPase homolog A1D 0.02 Orthogroups_2024-Update
Brara.A00988.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
LOC_Os03g60870 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
MpVg00760.1 No alias No annotation 0.03 Orthogroups_2024-Update
Sobic.010G163600.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Solyc01g103380 No alias Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT) 0.02 Orthogroups_2024-Update
Solyc06g005810 No alias Ras-related protein Rab11C (AHRD V3.3 *** RB11C_LOTJA) 0.03 Orthogroups_2024-Update
Solyc11g010100 No alias Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC) 0.03 Orthogroups_2024-Update
evm.model.contig_435.23 No alias (q39572|yptc6_chlre : 307.0) Ras-related protein YPTC6 -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 178
No external refs found!