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  5. A4A49_25869

A4A49_25869


Description : pumilio-like 12


Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_25869
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
At1g35730 No alias pumilio 9 [Source:TAIR;Acc:AT1G35730] 0.03 Orthogroups_2024-Update
GRMZM2G006287 No alias pumilio 7 0.03 Orthogroups_2024-Update
Glyma.04G102900 No alias pumilio 7 0.03 Orthogroups_2024-Update
Glyma.06G104100 No alias pumilio 7 0.03 Orthogroups_2024-Update
Kfl00224_0090 kfl00224_0090_v1.1 (at5g56510 : 382.0) Encodes a member of the Arabidopsis... 0.02 Orthogroups_2024-Update
LOC_Os03g09150 No alias pumilio-family RNA binding repeat domain containing... 0.03 Orthogroups_2024-Update
LOC_Os12g31000 No alias pumilio-family RNA binding repeat domain containing... 0.03 Orthogroups_2024-Update
Potri.002G095400 No alias pumilio 7 0.03 Orthogroups_2024-Update
Sobic.008G100300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 464 498
IPR001313 Pumilio_RNA-bd_rpt 540 574
IPR001313 Pumilio_RNA-bd_rpt 688 709
IPR001313 Pumilio_RNA-bd_rpt 578 598
IPR001313 Pumilio_RNA-bd_rpt 651 682
IPR001313 Pumilio_RNA-bd_rpt 613 636
IPR001313 Pumilio_RNA-bd_rpt 508 537
No external refs found!