A4A49_25957

Description : pentatricopeptide repeat-containing protein

Gene families : OG_42_0010109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010109_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_25957
Cluster	HCCA clusters: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi1g19790	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G217200	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	130	178
IPR002885	Pentatricopeptide_repeat	448	493
IPR002885	Pentatricopeptide_repeat	231	279
IPR032867	DYW_dom	620	742
IPR002885	Pentatricopeptide_repeat	521	544
IPR002885	Pentatricopeptide_repeat	306	330
IPR002885	Pentatricopeptide_repeat	420	443

External Links

No external refs found!