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  5. A4A49_25977

A4A49_25977


Description : pectate lyase


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_25977
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At5g09280 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q9FY87] 0.03 Orthogroups_2024-Update
Glyma.11G244900 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.15G110500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G002880.2 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
PSME_00019824-RA No alias (at1g67750 : 587.0) Pectate lyase family protein;... 0.02 Orthogroups_2024-Update
Seita.4G033100.1 No alias EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Sopen05g008950 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 128 311
No external refs found!