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  5. Sopen11g005010

Sopen11g005010


Description : Core histone H2A/H2B/H3/H4


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g005010
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G179005 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G017800.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU7Hr1G100450.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
PSME_00010790-RA No alias (at5g65360 : 186.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.001G016900 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G235700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G014300 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G096900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Solyc11g010230 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!